describe_search_capabilities
ChatGPTDescribe how agents should query Protplex and interpret results.
Productivity
Overview
Protplex makes the Protein Data Bank searchable in natural language through distilled structural, functional, and biochemical profiles. It helps users search 240,000+ PDB structures across function, structure, chemistry, organism, assembly, ligands, and experimental context.
Tools
describe_search_capabilities
ChatGPTDescribe how agents should query Protplex and interpret results.
get_structure_details
ChatGPTFetch metadata and bucket-level evidence text for one PDB structure. Use this after search_structures to verify why a candidate matched. The bucket_texts field is the primary evidence source for function, structure, source organism, ligand chemistry, and experimental details.
get_structure_details
ChatGPTFetch metadata and bucket-level evidence text for one PDB structure. Use this after search_structures to verify why a candidate matched. The bucket_texts field is the primary evidence source for function, structure, source organism, ligand chemistry, and experimental details.
search_structures
ChatGPTSearch PDB protein structures with semantic retrieval plus optional biological filters. Use English for discovery queries about function, structure, origin, interfaces, cofactors, ligands, domains, methods, or resolution. Results are candidates to inspect, not final biological assertions. For promising hits, call get_structure_details to read bucket-level evidence.
search_structures
ChatGPTSearch PDB protein structures with semantic retrieval plus optional biological filters. Use English for discovery queries about function, structure, origin, interfaces, cofactors, ligands, domains, methods, or resolution. Results are candidates to inspect, not final biological assertions. For promising hits, call get_structure_details to read bucket-level evidence.
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ChatGPT
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Research DiscoveryWorks with
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